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Publicationer information ikon

Gaussian Process Modelling of Genome-wide High-throughput Sequencing Time Series

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Topa, Hande
Aalto University2018Publicationer information ikon

Reproducibility and repeatability of six high-throughput 16S rDNA sequencing protocols for microbiota profiling

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DOI
10.1016/j.mimet.2018.03.003
Raju, Sajan C.; Lagström, Sonja; Ellonen, Pekka; de Vos, Willem M.; Eriksson, Johan G.; Weiderpass, ...
Journal of microbiological methods2018Publicationer information ikon

Towards the Forest Virome: High-Throughput Sequencing Drastically Expands Our Understanding on Virosphere in Temperate Forest Ecosystems

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DOI
10.3390/microorganisms9081730
Rumbou, Artemis; Vainio, Eeva J.; Büttner, Carmen
Microorganisms2021Publicationer information ikon

V-REVCOMP: automated high-throughput detection of reverse complementary 16S rRNA gene sequences in large environmental and taxonomic datasets

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DOI
10.1111/j.1574-6968.2011.02274.x
Hartmann, Martin; Howes, Charles G; Veldre, Vilmar; Schneider, Salome; Vaishampayan, Parag A; Yannar...
FEMS Microbiology Letters2011Publicationer information ikon

Scalable computational methods for high-throughput sequencing data analytics in population genomics

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Maarala, Altti Ilari
-2021Publicationer information ikon

High-throughput sequencing data and the impact of plant gene annotation quality

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10.1093/jxb/ery434
Vaattovaara, Aleksia Fanni Maria; Leppälä, Johanna Maria; Salojärvi, Jarkko Tapani; Wrzaczek, Michae...
Journal of Experimental Botany2019Publicationer information ikon

Recommendations for the introduction of metagenomic high-throughput sequencing in clinical virology, part I: Wet lab procedure

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10.1016/j.jcv.2020.104691
López-Labrador F. Xavier, Brown Julianne R., Fischer Nicole, Harvala Heli, Van Boheemen Sander, Cine...
Journal of clinical virology2021Publicationer information ikon

Diarrhoea-predominant irritable bowel syndrome distinguishable by 16S rRNA gene phylotype quantification

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DOI
10.3748/wjg.15.5936
Lyra, A.; Rinttilä, T.; Nikkilä, J.; Krogius-Kurikka, L.; Kajander, K.; Malinen, E.; Mättö, Jaana; M...
World Journal of Gastroenterology2009Publicationer information ikon

BARCOSEL:a tool for selecting an optimal barcode set for high-throughput sequencing

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10.1186/s12859-018-2262-7
Somervuo, Panu; Koskinen, Patrik; Mei, Peng; Holm, Liisa; Auvinen, Petri; Paulin, Lars
BMC Bioinformatics2018Publicationer information ikon

Using amplicon sequencing of rpoB for identification of inoculant rhizobia from peanut nodules

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10.1111/lam.13599
Mousavi, S. Abdollah; Gao, Yao; Penttinen, Petri; Frostegård, Åsa; Paulin, Lars; Lindström, Kristina
Letters in applied microbiology2022

Gaussian Process Modelling of Genome-wide High-throughput Sequencing Time Series

Öppen tillgång
2018

Reproducibility and repeatability of six high-throughput 16S rDNA sequencing protocols for microbiota profiling

Referentgranskad
Öppen tillgång
DOI
10.1016/j.mimet.2018.03.003
2018

Towards the Forest Virome: High-Throughput Sequencing Drastically Expands Our Understanding on Virosphere in Temperate Forest Ecosystems

Referentgranskad
Öppen tillgång
DOI
10.3390/microorganisms9081730
2021

V-REVCOMP: automated high-throughput detection of reverse complementary 16S rRNA gene sequences in large environmental and taxonomic datasets

Referentgranskad
DOI
10.1111/j.1574-6968.2011.02274.x
2011

Scalable computational methods for high-throughput sequencing data analytics in population genomics

Öppen tillgång
2021

High-throughput sequencing data and the impact of plant gene annotation quality

Referentgranskad
Öppen tillgång
DOI
10.1093/jxb/ery434
2019

Recommendations for the introduction of metagenomic high-throughput sequencing in clinical virology, part I: Wet lab procedure

Referentgranskad
Öppen tillgång
DOI
10.1016/j.jcv.2020.104691
2021

Diarrhoea-predominant irritable bowel syndrome distinguishable by 16S rRNA gene phylotype quantification

Referentgranskad
DOI
10.3748/wjg.15.5936
2009

BARCOSEL:a tool for selecting an optimal barcode set for high-throughput sequencing

Referentgranskad
Öppen tillgång
DOI
10.1186/s12859-018-2262-7
2018

Using amplicon sequencing of rpoB for identification of inoculant rhizobia from peanut nodules

Referentgranskad
Öppen tillgång
DOI
10.1111/lam.13599
2022